PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022974323.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 322aa MW: 36014.8 Da PI: 6.8532

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022974323.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.5	4.7e-13	118	169	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ +++l+P++ + ++ + a+i A++++k+L+ XP_022974323.1 118 QRMTHIAVERNRRRQMNDHLNVIKSLIPTS---YIQRGDQASIIGGAIDFVKELE 169 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MGCSKQQFSS LEFDEFDEAY LFTSSLDEKM PFLHMLQCVE EPFKEPSFQN LLKLQQHLSN 60 DKPWKQEVNS ASCRVSAECN QNGGLCRTQM ENSSPPTKER RKRKRLRPAK NKEEVESQRM 120 THIAVERNRR RQMNDHLNVI KSLIPTSYIQ RGDQASIIGG AIDFVKELEQ LLECLEAQRK 180 ERKGEGDEEG SPTSSTATGM ASNGRIGEGV CAEVKSEVGE IEVTMIQAHV NLKIKCPKRQ 240 GQLLKAIVAL EDLRLSVLHL NISTSQATAT VLYSFNLKIE DECKLGSAVQ IAGAVHEILS 300 FINDGSQVNE VKGNLRQYSG SG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	99	106	ERRKRKRL
2	100	105	RRKRKR
3	119	130	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46810.1	3e-70	bHLH family protein