PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022974552.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 212aa    MW: 24215.1 Da    PI: 6.3553
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022974552.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.65.3e-172469148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg++T+eE+  ++ ++++lG++ W++Ia+ ++ gRt++++k++w+++l
   XP_022974552.1 24 RGNFTQEEQNTILYLHEKLGNR-WSAIAAQLP-GRTDNEIKNFWHTHL 69
                     89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MCLLRCGKSC RLRWINYLRP DIKRGNFTQE EQNTILYLHE KLGNRWSAIA AQLPGRTDNE  60
IKNFWHTHLK KRAMKKQSND SAIVEPKSKP PQKLNSSNQY EFPSSSLDHS SVTDSPAAVW  120
GGCNEIEKEQ RIEIFEAFHQ TVGGVWAEEA STGPMFKSSA FNDEEQVQSL FRAMDSMEFG  180
CYYDNSSSMN DSMEFWYSVF VKAGGSLNDP AF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.16e-46MYB family protein