PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022974566.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 301aa    MW: 33484 Da    PI: 4.9847
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022974566.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.91.4e-30148206259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+ver+++dp ++++tY+ eHnh+
  XP_022974566.1 148 SDIWAWRKYGQKPIKGSPYPRGYYRCSSSkGCMARKQVERNRSDPGMFIVTYTAEHNHP 206
                     79*************************998****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MEMEVDWDLH AVVRGYSAMT SAAVPSSDSY SVPSNSNNSV PMAFGRDQTN RMLSLQDPFD  60
GSNCNSTEEL QEFFNPFLPK SQRSPPLPPP APPLLSSPAV KILTHQKQLQ NTHLPKQLHS  120
TSVSAPRSKR RKNQLKKVCQ VPAEALSSDI WAWRKYGQKP IKGSPYPRGY YRCSSSKGCM  180
ARKQVERNRS DPGMFIVTYT AEHNHPAPTH RNSLAGSTRQ KPNTPTPTDA GSEKPDAKQL  240
VCSSEDLSTI MESKEEEKEE SLAEDEEDND LGDSDLIVND DFYVGFEELD SPNADDCFSD  300
D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.12e-69WRKY family protein