PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022974644.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 346aa MW: 38934.2 Da PI: 4.6026

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022974644.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	90.3	1.5e-28	125	186	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 l+Dg++WrKYGqK+++g++fpr YYrCt++ gC ++k+v++s++dp+++e+tY+g+H+++ XP_022974644.1 125 LNDGHSWRKYGQKDIHGANFPRCYYRCTHRnvrGCLATKQVQKSDNDPNIFEVTYRGQHTCN 186 58*************************99999************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MEHKSLITEL TQGKEMAIQL KTHLPSPMAI QLKTHLPSPP PPGSSPQALI FLTEMIQSSF 60 ESALLLLNWN PKDPSEEEEE EEEEEPTKNK RKNSSRDVLL KRRKLLPKWT EEVKVGSGSA 120 AEGPLNDGHS WRKYGQKDIH GANFPRCYYR CTHRNVRGCL ATKQVQKSDN DPNIFEVTYR 180 GQHTCNQSAN LGLISVSNRN EIPEETHQNQ QNPNSEILFN FGEQQHFGLK IKTEDFDDVF 240 PPFCFGSETV DENVFLEQMM EPGFVADGNW SAAAVSSATS ETAWDLSGYG GEIQGVQSSE 300 QSNMTEMVSA TTSVTNSPIG NGDWDLSLDK IDFDQFFHFD RLDFIS

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MEHKSLITEL TQGKEMAIQL KTHLPSPMAI QLKTHLPSPP PPGSSPQALI FLTEMIQSSF  60
ESALLLLNWN PKDPSEEEEE EEEEEPTKNK RKNSSRDVLL KRRKLLPKWT EEVKVGSGSA  120
AEGPLNDGHS WRKYGQKDIH GANFPRCYYR CTHRNVRGCL ATKQVQKSDN DPNIFEVTYR  180
GQHTCNQSAN LGLISVSNRN EIPEETHQNQ QNPNSEILFN FGEQQHFGLK IKTEDFDDVF  240
PPFCFGSETV DENVFLEQMM EPGFVADGNW SAAAVSSATS ETAWDLSGYG GEIQGVQSSE  300
QSNMTEMVSA TTSVTNSPIG NGDWDLSLDK IDFDQFFHFD RLDFIS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	90	104	KRKNSSRDVLLKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11070.2	1e-38	WRKY family protein