PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022974956.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 327aa MW: 36771.7 Da PI: 4.6057

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022974956.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	90.4	1.4e-28	108	169	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 l+Dg++WrKYGqK+++g++fpr YYrCt++ gC ++k+v++s++dp+++e+tY+g+H+++ XP_022974956.1 108 LNDGHSWRKYGQKDIHGANFPRCYYRCTHRnvrGCLATKQVQKSDNDPNIFEVTYRGQHTCN 169 58*************************99999************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MEHKSLITEL TQGKEMAIQL KTHLPSPPPP GSSPQALIFL TEMIQSSFEN ALLLLNWNPK 60 DPSEEEEEPT KNKRKNSSRD VLLKRRKLLP KWTEEVKVGS GSAAEGPLND GHSWRKYGQK 120 DIHGANFPRC YYRCTHRNVR GCLATKQVQK SDNDPNIFEV TYRGQHTCNQ SANLGLISVS 180 NRNEIPEETH QNQQNPNSEI LFNFGEQQHF GLKTEDFDDV FPPFCFGSET VDEDVFLEQM 240 MEPGFVADGN WSAAAVSSAT SETAWDLSGY GGEIQGVQSS EQSNMTEMVS ATTSVTNSPI 300 GNGDWELSLD KIDFDQFFHF DRLDFIS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	73	87	KRKNSSRDVLLKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11070.1	4e-41	WRKY family protein