PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022975053.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 225aa    MW: 25012.8 Da    PI: 4.7714
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022975053.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.91e-1786136356
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                     y+GVr+++ +g+++AeIrd +    +  r++lg+f++ae Aa a+++a+ +++g+
  XP_022975053.1  86 YRGVRRRP-WGKFAAEIRDSTR---HgIRVWLGTFDSAEAAALAYDQAAFAMRGA 136
                     9*******.**********422...25*************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MDYSGFFSPA SDFSSESSFD SPESSFINLD HNFLPFNEND SEEMLLYELI SEGRQDSSEK  60
GIGAVRVKEE EVDSVGEESP KKERSYRGVR RRPWGKFAAE IRDSTRHGIR VWLGTFDSAE  120
AAALAYDQAA FAMRGAAAIL NFPVDRVRES LKEMNCSGDG YGLAEDGGSP VIALKRKHSV  180
RRNGISKKKK ERDVRIQNMV VLEDLGTEYL EELLGCSQSG SPCCC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1175190KRKHSVRRNGISKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.16e-60ERF family protein