PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022975324.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 412aa MW: 45136.5 Da PI: 7.1406

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022975324.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	31	4.4e-10	229	276	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_022975324.1 229 SHSLAERARREKISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 276 8************************....999***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MNRALPEMLQ CLNTAGDCPD NLSVLERQRG RLKFQQDQLL QQSCFNRVDY GGGFPPPGVV 60 PADHLTGFPG FMSGGGSGGG MSLVEMVMGA VKPDPGLGGK FDPSLLLNAT AYELNSSLSR 120 TSSCPPAVTP AVSAAGRESF KKRKAEKVHT TAAPTNNNKN KVDKNSKEKR IKTSSEEEEE 180 LSKNNNSSTT TNNNRETSAD TSKENSKASE VQKPGYIHVR ARRGQATDSH SLAERARREK 240 ISERMKYLQD LVPGCNKITG KAGMLDEIIN YVQSLQRQVE FLSMKLSTVN PRLEFNVDDL 300 FTKEVFPPAI GEMSSEMTDP SSNLQFNPNN QQVVSCSGLE IGINTSDIAL RRSFPENFVD 360 SSCLTQFQTS SGWDMDLQNL YNVGFHQGRS SNAFSSHPYT GTIEGGHIKM EM

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MNRALPEMLQ CLNTAGDCPD NLSVLERQRG RLKFQQDQLL QQSCFNRVDY GGGFPPPGVV  60
PADHLTGFPG FMSGGGSGGG MSLVEMVMGA VKPDPGLGGK FDPSLLLNAT AYELNSSLSR  120
TSSCPPAVTP AVSAAGRESF KKRKAEKVHT TAAPTNNNKN KVDKNSKEKR IKTSSEEEEE  180
LSKNNNSSTT TNNNRETSAD TSKENSKASE VQKPGYIHVR ARRGQATDSH SLAERARREK  240
ISERMKYLQD LVPGCNKITG KAGMLDEIIN YVQSLQRQVE FLSMKLSTVN PRLEFNVDDL  300
FTKEVFPPAI GEMSSEMTDP SSNLQFNPNN QQVVSCSGLE IGINTSDIAL RRSFPENFVD  360
SSCLTQFQTS SGWDMDLQNL YNVGFHQGRS SNAFSSHPYT GTIEGGHIKM EM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	141	169	KKRKAEKVHTTAAPTNNNKNKVDKNSKEK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34530.1	7e-55	bHLH family protein