PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022975683.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 147aa    MW: 16784.6 Da    PI: 9.0006
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022975683.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.61.3e-1434124598
                     -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEEEE CS
              B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelvvkvf 97 
                     l++s+v   +++ lp kf +             +   +g++W++ + y +++g+ + tk W++Fv++n+Lk gD +vF+l+  + s  +++v+++
  XP_022975683.1  34 LSKSHVAPICNMFLPAKFHSVLPA---IM-IPAVLYCEGKKWKIDY-YGNRRGKALDTKQWRKFVNDNHLKCGDACVFELIeCSsSVLKFRVQIL 123
                     778999999999999999744432...22.23455569********.8888888999**********************9965557777777777 PP

                     - CS
              B3  98 r 98 
                     r
  XP_022975683.1 124 R 124
                     6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MQSQEKPPTE PTEMQPQNSR ILPLSGKPYH GVILSKSHVA PICNMFLPAK FHSVLPAIMI  60
PAVLYCEGKK WKIDYYGNRR GKALDTKQWR KFVNDNHLKC GDACVFELIE CSSSVLKFRV  120
QILRGDIPFE LHEKFSGESR NTPILID
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.11e-10B3 family protein