PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022975802.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 314aa    MW: 35382 Da    PI: 4.5152
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022975802.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.93.1e-12149192654
                     HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                      ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  A+eY+k+L
  XP_022975802.1 149 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTAILADAIEYVKEL 192
                     589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MELNEHYLFE ELLALKREIN WEFAMPTDIN GWNFDCSDSM AMDELNLSYL LNGQGQYSFP  60
ADQFTAAAAA STGDSMSFEV YNGEYPIMNM EEEELGILED EIHNLEVQAN CKVEAVQSPE  120
EIVPNAGDFG QKIVNSNRKK LQGQPSKNLM AERRRRKRLN DRLSMLRSIV PKISKMDRTA  180
ILADAIEYVK ELVEKIKNLQ TEIEAGNDPN KLGILRDLKR NEYSVRNSAK FNVERREGET  240
GIEICCAAKP GLLLSTVQTL EALGLDIQHC VVSCFNDFAI QASCSEGEEQ RSRMSTEEVK  300
QALFQTAGYG GRCP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1138158RKKLQGQPSKNLMAERRRRKR
2152159ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.12e-75bHLH family protein