PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022975997.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MIKC_MADS

Protein Properties

Length: 211aa MW: 24034.4 Da PI: 9.3758

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022975997.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	86.9	1.1e-27	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRr g+lKKAeEL +LCda+v viifsst+klyeyss XP_022975997.1 10 RIDNSTSRQVTFSKRRSGLLKKAEELAILCDADVGVIIFSSTNKLYEYSS 59 8***********************************************96 PP
2	K-box	78.6	1.6e-26	80	163	8	91
K-box 8 sleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeen 91 +++++ +++q+e+a L++++++L +++R+++Ge+L+ Ls k+Lq+Le+qLe sl+ iR kK+++l+++i++l +k ++++n XP_022975997.1 80 GNSTSEVKYWQREAAMLRQQLQSLHENHRQMMGEELTGLSAKDLQNLENQLEISLRGIRMKKEKILMDEIQDLNRKVYGTKDAN 163 3788999********************************************************************987777766 PP

Sequence ? help Back to Top
Protein Sequence Length: 211 aa Download sequence
MGRCKIVIRR IDNSTSRQVT FSKRRSGLLK KAEELAILCD ADVGVIIFSS TNKLYEYSSS 60 SMKTLIERYN KTKEEHHQLG NSTSEVKYWQ REAAMLRQQL QSLHENHRQM MGEELTGLSA 120 KDLQNLENQL EISLRGIRMK KEKILMDEIQ DLNRKVYGTK DANGAHISSL TNGLSVGEDA 180 GIPIDLQLSQ PQPQDHEAPE RATKLGRLQL R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37940.1	2e-83	MIKC_MADS family protein