PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022976360.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 87aa    MW: 9818 Da    PI: 9.603
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022976360.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.62.8e-08851344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     +WT++  + + +a + + ++   +W+  a+ +g  +t++++k ++
   XP_022976360.1  8 NWTAQQNKAFENALAIYDKNtpgRWHILAKAVG-SKTAEEVKRHY 51
                     8********************************.**********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 87 aa     Download sequence    
MAMGSGPNWT AQQNKAFENA LAIYDKNTPG RWHILAKAVG SKTAEEVKRH YDRLVEDVNR  60
IETGQVPFPN YRKPGPAGRG FRFVDDE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.13e-32MYB_related family protein