PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022976499.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 441aa MW: 48362.2 Da PI: 6.9973

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022976499.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	112	8.3e-35	43	153	3	89
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg......... 88 g+kdrhsk++T++g RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++akpai++l++++ +++ ++++ +s++++++++ XP_022976499.1 43 GRKDRHSKVCTAKGTRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKPAIDKLPELPGWNPNVLDTNTGKSATHEEKKNseykipvan 137 89*************************************************************65555455333333333322222233444444 PP TCP 89 ...............k 89 + XP_022976499.1 138 hppegsitrnsyrraN 153 4444444444444440 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MGEFWNQRPG KSPKPGVRSR GGGGGGVSEI VEVQGGRIVR SIGRKDRHSK VCTAKGTRDR 60 RVRLSAHTAI EFYDVQDRLG YDRPSKAVDW LIKKAKPAID KLPELPGWNP NVLDTNTGKS 120 ATHEEKKNSE YKIPVANHPP EGSITRNSYR RANFVFGNGG ISECTMQNLE KTSTEENPNS 180 DNSCFLPPSF NSDSIVDSFK SFIPMTTTAA AGTPSSIFEF DTFPPDLQSR TSSRSQDLRL 240 SLQSLKAPNS NLESEGTQHP IPQNHQNDHS FFSGTTSLYG FDEWSEQQPQ SALEINRFQR 300 IMHRNTVSAD HSSGGYGGDA GDGGVNGEFF YNSQVTTSNF PPASPCLQPL FGDNQLVSQR 360 GPLQSSYTPS IRAWIDPSIT FVDNQQHHVT PQSMNPSSFP GLGFAYGGFS RFVIPALIPG 420 EEEHDGMSEK PSSASSNSRH C

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MGEFWNQRPG KSPKPGVRSR GGGGGGVSEI VEVQGGRIVR SIGRKDRHSK VCTAKGTRDR  60
RVRLSAHTAI EFYDVQDRLG YDRPSKAVDW LIKKAKPAID KLPELPGWNP NVLDTNTGKS  120
ATHEEKKNSE YKIPVANHPP EGSITRNSYR RANFVFGNGG ISECTMQNLE KTSTEENPNS  180
DNSCFLPPSF NSDSIVDSFK SFIPMTTTAA AGTPSSIFEF DTFPPDLQSR TSSRSQDLRL  240
SLQSLKAPNS NLESEGTQHP IPQNHQNDHS FFSGTTSLYG FDEWSEQQPQ SALEINRFQR  300
IMHRNTVSAD HSSGGYGGDA GDGGVNGEFF YNSQVTTSNF PPASPCLQPL FGDNQLVSQR  360
GPLQSSYTPS IRAWIDPSIT FVDNQQHHVT PQSMNPSSFP GLGFAYGGFS RFVIPALIPG  420
EEEHDGMSEK PSSASSNSRH C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	2e-67	TCP family protein