PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022976755.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 518aa MW: 56362.2 Da PI: 6.6445

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022976755.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	51.9	1.3e-16	320	366	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRR+riN+++ L+el+P++ K +Ka++L +A+eY+ksLq XP_022976755.1 320 VHNLSERRRRERINEKMKALQELIPHC-----NKTDKASMLDEAIEYLKSLQ 366 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 518 aa Download sequence
MNYCFPDWNL EGDLPSASHK KSMGHEHDDL VELLWRNGQV VLQSQKARKP SLIQKQNQPL 60 DRTNISSGIS STLIQDDDTV SWIHDPLDDD SFDKEFCSEF FSEMPQTRFG AFDAAAATQN 120 SKPPAVLAEL PTNTMPPPKY QCSGSIRQTK DLGDLGKMVN FSQVPVALRG DLGSSNGGRE 180 PGNMIHGEVR DCSATTVGSS HCGSNQVPNP EPIVSRVSTS GVGNAGLSVD LSNKKMAAQG 240 EREKTETMDP TATSSSGGSG SSMDRSRTIG QSNGGNGNKR KGRDGEESEC QSETAELESA 300 EGNKAAPRSG FPRRTRAAEV HNLSERRRRE RINEKMKALQ ELIPHCNKTD KASMLDEAIE 360 YLKSLQLQLQ VMWMGNGMAP MMFTGVQHYM SRMAMGMGMA QPSMPSMPSI HNSMQLPRVS 420 VVDQSVSVTP TPNQPTICQP QLFNPVNYQN QMSNPALQEQ YARLMGFHHM QPSSQPINVF 480 RFCPSKVLQS QTPAATGPPS GPTFGGSIAN DIVNGTLG

Sequence ? help Back to Top

Protein Sequence Length: 518 aa Download sequence

MNYCFPDWNL EGDLPSASHK KSMGHEHDDL VELLWRNGQV VLQSQKARKP SLIQKQNQPL  60
DRTNISSGIS STLIQDDDTV SWIHDPLDDD SFDKEFCSEF FSEMPQTRFG AFDAAAATQN  120
SKPPAVLAEL PTNTMPPPKY QCSGSIRQTK DLGDLGKMVN FSQVPVALRG DLGSSNGGRE  180
PGNMIHGEVR DCSATTVGSS HCGSNQVPNP EPIVSRVSTS GVGNAGLSVD LSNKKMAAQG  240
EREKTETMDP TATSSSGGSG SSMDRSRTIG QSNGGNGNKR KGRDGEESEC QSETAELESA  300
EGNKAAPRSG FPRRTRAAEV HNLSERRRRE RINEKMKALQ ELIPHCNKTD KASMLDEAIE  360
YLKSLQLQLQ VMWMGNGMAP MMFTGVQHYM SRMAMGMGMA QPSMPSMPSI HNSMQLPRVS  420
VVDQSVSVTP TPNQPTICQP QLFNPVNYQN QMSNPALQEQ YARLMGFHHM QPSSQPINVF  480
RFCPSKVLQS QTPAATGPPS GPTFGGSIAN DIVNGTLG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	325	330	ERRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43010.2	2e-62	bHLH family protein