PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022977086.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB

Protein Properties

Length: 288aa MW: 32709.8 Da PI: 7.4016

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022977086.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.9	1.5e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W+++Ed +l+ +++q+G+g +W + ++++g++R++k+c++rw++yl XP_022977086.1 14 KGPWSPDEDAKLKFYIEQHGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	39.9	9.9e-13	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ XP_022977086.1 69 GDFTEEEDRIICSLYVNIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 789****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
MGRAPCCDKA NVKKGPWSPD EDAKLKFYIE QHGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGD FTEEEDRIIC SLYVNIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKRLYGK 120 HHEKQQQPVR RGRKIKSEIG NSMDIVFDNH VIYDNDNNQL PFLPELTTAL NSPPPPPPYA 180 NYQPLQFPST PQQLSGVDLS RRDDVQFEMD GGSCLPATSC QVGELEKVVY SNTASFEDGL 240 QFSYDNNGLM NDLDWGEMSC LISAPSYSSM AHDSMIGSSY LEQQKQKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	5e-79	MYB family protein