PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022977266.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HD-ZIP

Protein Properties

Length: 207aa MW: 23915.7 Da PI: 4.8728

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022977266.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	64.4	1.6e-20	49	104	1	56
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++k+ +++++qle Le++F+++ ++ +++ +L+k+lgL+ rq+ vWFqNrRa+++ XP_022977266.1 49 KKKKNRLSQDQLESLERCFQEDGMLDPDTKMKLSKELGLQPRQIAVWFQNRRARWR 104 789999*************************************************9 PP
2	HD-ZIP_I/II	114.7	5.5e-37	50	140	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk rls++q+++LE++F+e+ L+p+ K++l++eLglqprq+avWFqnrRAR++tkqlE y++Lk+++d++++e+++L++ev +Lr+ l XP_022977266.1 50 KKKNRLSQDQLESLERCFQEDGMLDPDTKMKLSKELGLQPRQIAVWFQNRRARWRTKQLEYLYHTLKQEFDTISKEKHTLQQEVLKLRSML 140 59*************************************************************************************9877 PP

Sequence ? help Back to Top
Protein Sequence Length: 207 aa Download sequence
MEWNNGSLIP SPYTSYNYYY NYNYNLDEFP VLEAKKPEVE SVVGGVDEKK KKNRLSQDQL 60 ESLERCFQED GMLDPDTKMK LSKELGLQPR QIAVWFQNRR ARWRTKQLEY LYHTLKQEFD 120 TISKEKHTLQ QEVLKLRSML GEQTMSNEEP MAYEDASGEA TVESTSVGVI GSCNNYTHNN 180 VEDLVKISGS GPPFWWGAEA AHLPSYP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03790.1	2e-39	HD-ZIP family protein