PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022977482.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 350aa    MW: 38048.7 Da    PI: 5.9758
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022977482.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.11.1e-17257290134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     C +C  tkTp+WR gp g+ktLCnaCG++y++ +
  XP_022977482.1 257 CMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 290
                     99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MIGNSLVDEI DCGSFFDHID DLLDFPVEDV DVGLPPMNRG DSANSFPTIW PTHSESLPGS  60
VSVFSANDNA DLSAQLSVPY EDIVQLEWLS NFVEDSFRGG SLTMNKEEPK DLTYNQFQTS  120
SPVSVLESSS SCSSDKSLQS RSSPEQTVAT PGQQRGRARS KRPRPATFSP RPPIQLISPA  180
SSVTETATPD QPLQLAPKAL SDADNFAESQ PLIKMPKHGG ASGIQNTKNK KIKLSFSLAP  240
LDAATGNQSS PSSVRKCMHC EITKTPQWRA GPMGPKTLCN ACGVRYKSGR LFPEYRPAAS  300
PTFIPSLHSN SHKKVLEMRN KVDESTNAIT LSMQPELIPN TNSAISMDYM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1161165KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.11e-42GATA family protein