PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022977492.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 434aa MW: 50101.2 Da PI: 8.779

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022977492.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.7	8.3e-11	312	359	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E +lvd+++++G+g+W++I r++ +Rt+ +++++w+++l XP_022977492.1 312 WTLTEVMRLVDGIAEYGTGRWTRIKRHLFassPHRTPIDLRDKWRNLL 359 **************************99**************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MDQEVHFCQK FTNMNYHWVK VEGSFLPAPL NESNEVDHFL VEPKSDHELG NCLRVQDFSR 60 DFGYEIQTND AEVDENSFRQ NRGLQLGKLS SESKSQGSSR SDTDAFEISE LSATMVMEAE 120 FNNTPVERSL THELFSGLRT RGGCATPFEG NICNTILDNN NIHKFNTNEN YLENEKISDE 180 KGDIVASKLA SCSRERRLRK PTRRYIEEFA DSKSENNKGR RKPPTKDKYL KVTSTEESNH 240 IRQVQMLTPK DELHCGTSVP VQSRSQRRHP EKHVPVSGFL SEDEPSATEC KNVYSSAKIC 300 KKYDRRKHQK MWTLTEVMRL VDGIAEYGTG RWTRIKRHLF ASSPHRTPID LRDKWRNLLK 360 ASCVNIQNSK GTECKQPHAS RPLPKSLLQR VYELANIYPY PKERSPKSVR EATPPMYLIE 420 SNSLSFNWGR KKYE

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MDQEVHFCQK FTNMNYHWVK VEGSFLPAPL NESNEVDHFL VEPKSDHELG NCLRVQDFSR  60
DFGYEIQTND AEVDENSFRQ NRGLQLGKLS SESKSQGSSR SDTDAFEISE LSATMVMEAE  120
FNNTPVERSL THELFSGLRT RGGCATPFEG NICNTILDNN NIHKFNTNEN YLENEKISDE  180
KGDIVASKLA SCSRERRLRK PTRRYIEEFA DSKSENNKGR RKPPTKDKYL KVTSTEESNH  240
IRQVQMLTPK DELHCGTSVP VQSRSQRRHP EKHVPVSGFL SEDEPSATEC KNVYSSAKIC  300
KKYDRRKHQK MWTLTEVMRL VDGIAEYGTG RWTRIKRHLF ASSPHRTPID LRDKWRNLLK  360
ASCVNIQNSK GTECKQPHAS RPLPKSLLQR VYELANIYPY PKERSPKSVR EATPPMYLIE  420
SNSLSFNWGR KKYE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	195	201	ERRLRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	3e-24	MYB_related family protein