PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022977503.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family LBD
Protein Properties Length: 232aa    MW: 25587.8 Da    PI: 7.9452
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022977503.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26096.92.1e-302103197
          DUF260   1 aCaaCkvlrrkCakdCvlapyf.....paeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                     +C++C+vlr++C+++C+l+p++      ++q +++ +v+k+FG++ ++++++a+pe++r+ +++sl++eA+ r+ +Pv+Gavg++++++++++q+
  XP_022977503.1   2 SCNGCRVLRKGCSESCILRPCLqwietSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQA 96 
                     6*********************9998777889*************************************************************** PP

          DUF260  91 kaelall 97 
                     +++++l+
  XP_022977503.1  97 AVDTVLR 103
                     9998775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MSCNGCRVLR KGCSESCILR PCLQWIETSE AQGHATVFVA KFFGRAGLMS FISAVPESQR  60
PSLFQSLLFE ACGRTVNPVN GAVGLLWTGN WHVCQAAVDT VLRGGTLRPI NDFLAAGSPN  120
LSSDDTSEAE VACTDMWKLR DSYPNSRFSN SRSRLSPKRK RSEESSTKNQ LNDLNLRLTP  180
TFVSKSTPRA ATPSMNSEES ETTTCFESGL GDHHHYYPEE GTAQRKLLNL FV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67420.14e-79LBD family protein