PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022977543.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HSF
Protein Properties Length: 198aa    MW: 23081.2 Da    PI: 7.6707
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022977543.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind98.56.5e-31161292102
                     HHHHHHHHHCTG......................GGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTT CS
    HSF_DNA-bind   2 Flkklyeilede......................elkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekksks 74 
                     Fl+k+y++l+++                        ++++sw+++g+ f+v+ + +f++ +LpkyFkh+nf+SF+RQLn+YgFkk++ ++     
  XP_022977543.1  16 FLSKTYDLLQKDgsfhfkaadeedeedeedeedgGGNRIVSWNADGSGFIVWSPADFSEVLLPKYFKHNNFSSFIRQLNTYGFKKTSPKR----- 105
                     88899999985555555555556666666666668899************************************************9998..... PP

                     XTTSEEEEESXXXXXXXXXXXXXXXXXX CS
    HSF_DNA-bind  75 kekiweFkhksFkkgkkellekikrkks 102
                         weFkh++F++g++++l +i rkk 
  XP_022977543.1 106 ----WEFKHEKFQRGNRHMLVEIVRKKC 129
                     ....*********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MSLIMQSSRI RNPAPFLSKT YDLLQKDGSF HFKAADEEDE EDEEDEEDGG GNRIVSWNAD  60
GSGFIVWSPA DFSEVLLPKY FKHNNFSSFI RQLNTYGFKK TSPKRWEFKH EKFQRGNRHM  120
LVEIVRKKCE PSVFPAFLRS SHEGAVTMAV DQENGDHLLL MEENKNLRRQ KLELQAQIAQ  180
FKALRLRLLD CVGRRIEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62020.12e-39HSF family protein