PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022977681.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HD-ZIP

Protein Properties

Length: 224aa MW: 26101.3 Da PI: 7.2335

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022977681.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	64.9	1.1e-20	61	115	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++t+++++qle Le+ F+++ +++ +++ +L+k+lgL+ rq+ +WFqNrRa++k XP_022977681.1 61 KNKTKLSPDQLESLERRFQEEVKLDPDRKMKLSKELGLQPRQIAIWFQNRRARWK 115 789***************************************************9 PP
2	HD-ZIP_I/II	111.1	7.4e-36	62	150	2	90
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +k +ls +q+++LE+ F+ee kL+p+rK++l++eLglqprq+a+WFqnrRAR+ktkql + y++Lk+++d++++++++L++ev +Lr+ XP_022977681.1 62 NKTKLSPDQLESLERRFQEEVKLDPDRKMKLSKELGLQPRQIAIWFQNRRARWKTKQLQHLYDTLKQEFDTISNQKHTLQQEVMKLRTM 150 799***********************************************************************************965 PP

Sequence ? help Back to Top
Protein Sequence Length: 224 aa Download sequence
MEWNNGSLTP KLLSPPLLHH QSSYTPCYNY NYTYNLDHFP VLETKKPAEE SVVGGVDQKN 60 KNKTKLSPDQ LESLERRFQE EVKLDPDRKM KLSKELGLQP RQIAIWFQNR RARWKTKQLQ 120 HLYDTLKQEF DTISNQKHTL QQEVMKLRTM LLLREEATRN HQGSMAYTDE EMAESTSVGV 180 RSSTNNYMYN NKVEDLVEIS GSGSGPPPPF WWGAEEDAHR PSYP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	110	118	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03790.1	2e-39	HD-ZIP family protein