PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022977883.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 294aa    MW: 32816.1 Da    PI: 6.6466
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022977883.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.83.4e-19216249134
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                     Cs+Cg+ kTp+WR gp g+ktLCnaCG+++++ +
  XP_022977883.1 216 CSHCGVQKTPQWRAGPLGSKTLCNACGVRFKSGR 249
                     *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MEAALKMGLI NKPSPKLHLD ELRSANPQSS ASPSSDYIFV DQLFNFSNEE EDEEEEEAEG  60
EEKNNHSSVS APLQLQQHRE SDENSNHSST NSSGDVFWSV SSRDFEDLEW LSHLVADSTQ  120
EEYSAVPLNC SVFLTEKPNS YQKEPTHHAP ILPNFESNLN TPFPSKPRSK RAKISGRVWS  180
LTNSISSPSL YPPQAKKPKK NSAEEGSGRG QAPRRCSHCG VQKTPQWRAG PLGSKTLCNA  240
CGVRFKSGRL FPEYRPACSP TFSSELHSNH HRKVLEMRQK KETETTHSGP DPTP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.22e-51GATA family protein