PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022977969.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MIKC_MADS

Protein Properties

Length: 234aa MW: 26560.7 Da PI: 9.7578

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022977969.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	85.8	2.6e-27	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n+ rqvtfskRr+g++KKA+ELS+LCdaeva+iifss+gk ye++s XP_022977969.1 10 RIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAS 59 8***********************************************86 PP
2	K-box	74.5	2.9e-25	85	170	13	98
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + + +q+e++ L++++ nLq+++R+l+Ge+L Ls+k+L++Le+qLe sl++iR kK+++l+++i+el +k ++++n +L +k+ XP_022977969.1 85 DVKLWQKEVSGLRQQLLNLQENNRKLMGEQLYGLSIKDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKV 170 5678******************************************************************************9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 234 aa Download sequence
MGRGKIVIRR IDNSASRQVT FSKRRKGLIK KAKELSILCD AEVALIIFSS SGKQYEFAST 60 SIESVIEKYN RRKEEDELLL NPISDVKLWQ KEVSGLRQQL LNLQENNRKL MGEQLYGLSI 120 KDLNSLESQL EFSLQSIRIK KEQILHDEIK ELNRKGILMH QQNVELANKV NLFCQENMEL 180 HRKVYGHDSR LEMSVATGNP LIPYGIISAA AAGPIGGDAG LRVPIHLQLS PREQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37940.1	2e-68	MIKC_MADS family protein