PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022977970.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MIKC_MADS
Protein Properties Length: 231aa    MW: 26133.2 Da    PI: 9.7578
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022977970.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF85.82.5e-271059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    ri+n+  rqvtfskRr+g++KKA+ELS+LCdaeva+iifss+gk ye++s
  XP_022977970.1 10 RIDNSASRQVTFSKRRKGLIKKAKELSILCDAEVALIIFSSSGKQYEFAS 59
                    8***********************************************86 PP
2K-box70.45.5e-24841671598
           K-box  15 eslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                     +  ++e++ L++++ nLq+++R+l+Ge+L  Ls+k+L++Le+qLe sl++iR kK+++l+++i+el +k   ++++n +L +k+
  XP_022977970.1  84 SDVKKEVSGLRQQLLNLQENNRKLMGEQLYGLSIKDLNSLESQLEFSLQSIRIKKEQILHDEIKELNRKGILMHQQNVELANKV 167
                     56789***************************************************************************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MGRGKIVIRR IDNSASRQVT FSKRRKGLIK KAKELSILCD AEVALIIFSS SGKQYEFAST  60
SIESVIEKYN RRKEEDELLL NPISDVKKEV SGLRQQLLNL QENNRKLMGE QLYGLSIKDL  120
NSLESQLEFS LQSIRIKKEQ ILHDEIKELN RKGILMHQQN VELANKVNLF CQENMELHRK  180
VYGHDSRLEM SVATGNPLIP YGIISAAAAG PIGGDAGLRV PIHLQLSPRE Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37940.12e-63MIKC_MADS family protein