PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022977971.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 898aa MW: 99246.3 Da PI: 6.6006

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022977971.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.5	1.2e-18	349	448	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k l+ sd+++ grlvlpkk+ae++ +++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++ + e++ XP_022977971.1 349 FEKMLSASDAGRIGRLVLPKKCAEAYfpSISQPEGLPLKVQDAKGKEWIFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRLE-PEGK 441 89************************666677788***********99899999999.*******************766.7777 PP .EEEEE- CS B3 92 lvvkvfr 98 lv+++++ XP_022977971.1 442 LVMGFRK 448 7777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 898 aa Download sequence
MSSAVTTASS SSSPISSRPC HNSDCKELRP ERSRKGWRLR TGDFAELCDR CASAYEEGRF 60 CETFHLNASG WRCCESCGKR VHCGCIVSAH AFTLLDPGGI ECMTCARKNV ILPLNPAWPQ 120 TLLFHSALSN RLKDLSVKNW SQLAGSGPVP WRQAPSMFNS SLPSGELHHR PPYEVDISAA 180 LNKLNTSERL PVSIEKRKND DFSERFLNGS LMQCGQDFCE NGTAGGIKCE DKPSSCSNIP 240 QQSSFVKEDS STTQYGLNVP YAPANEQSAR SRISGTHLRS TSLSPLPKQI HTNLQNGADS 300 SNEPQSRNGR PRGDSRGKNY LLPRYWPRFT DQELQQISVD SNSVITPLFE KMLSASDAGR 360 IGRLVLPKKC AEAYFPSISQ PEGLPLKVQD AKGKEWIFQF RFWPNNNSRM YVLEGVTPCI 420 QSMQLQAGDT VTFSRLEPEG KLVMGFRKAS AAADQENETK KTKNGAFIHG DVSNMKVKAE 480 LADPNSWAKV DKSGYIAKEV LGAKPSISRK RKSSTLGSKS KRLRIENEDM IELKITWEEA 540 QGLLRAPPNQ VPNVLVIEGF EFEEYEEAPV LGKPTIIPPD NTGERIQWNQ CEDCLKWRKL 600 PASALLPSKW TCSDNLWDPE RSFCSAAQEL STEQLEELLS PGDSAAPVKK ATKLEPDNVE 660 ALEGLDTLAN LAILGEGEVS QATTKHPRHR PGCSCIVCIQ PPSGKGPKHK QTCTCTVCLT 720 VKRRFQTLMQ RREKKQSVKE AETIRHQFQD EMFLDRSMDD ESLTCSNTST SKLIEEGKMN 780 DDSDEDPNRN KPSTSPFKGQ IDLNMQPERE DELSPGSDSG SMMKNLQDTG DRFFEQQRLN 840 SGGTGSSSSD PLEPGGECEH RGENISSVID LSSSNVDADK DHPATLSFNA SASMPSTG

Sequence ? help Back to Top

Protein Sequence Length: 898 aa Download sequence

MSSAVTTASS SSSPISSRPC HNSDCKELRP ERSRKGWRLR TGDFAELCDR CASAYEEGRF  60
CETFHLNASG WRCCESCGKR VHCGCIVSAH AFTLLDPGGI ECMTCARKNV ILPLNPAWPQ  120
TLLFHSALSN RLKDLSVKNW SQLAGSGPVP WRQAPSMFNS SLPSGELHHR PPYEVDISAA  180
LNKLNTSERL PVSIEKRKND DFSERFLNGS LMQCGQDFCE NGTAGGIKCE DKPSSCSNIP  240
QQSSFVKEDS STTQYGLNVP YAPANEQSAR SRISGTHLRS TSLSPLPKQI HTNLQNGADS  300
SNEPQSRNGR PRGDSRGKNY LLPRYWPRFT DQELQQISVD SNSVITPLFE KMLSASDAGR  360
IGRLVLPKKC AEAYFPSISQ PEGLPLKVQD AKGKEWIFQF RFWPNNNSRM YVLEGVTPCI  420
QSMQLQAGDT VTFSRLEPEG KLVMGFRKAS AAADQENETK KTKNGAFIHG DVSNMKVKAE  480
LADPNSWAKV DKSGYIAKEV LGAKPSISRK RKSSTLGSKS KRLRIENEDM IELKITWEEA  540
QGLLRAPPNQ VPNVLVIEGF EFEEYEEAPV LGKPTIIPPD NTGERIQWNQ CEDCLKWRKL  600
PASALLPSKW TCSDNLWDPE RSFCSAAQEL STEQLEELLS PGDSAAPVKK ATKLEPDNVE  660
ALEGLDTLAN LAILGEGEVS QATTKHPRHR PGCSCIVCIQ PPSGKGPKHK QTCTCTVCLT  720
VKRRFQTLMQ RREKKQSVKE AETIRHQFQD EMFLDRSMDD ESLTCSNTST SKLIEEGKMN  780
DDSDEDPNRN KPSTSPFKGQ IDLNMQPERE DELSPGSDSG SMMKNLQDTG DRFFEQQRLN  840
SGGTGSSSSD PLEPGGECEH RGENISSVID LSSSNVDADK DHPATLSFNA SASMPSTG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	508	513	SRKRKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-145	B3 family protein