PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022978267.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family Trihelix
Protein Properties Length: 257aa    MW: 31189.6 Da    PI: 10.4235
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022978267.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix70.72.7e-2236117286
        trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     W+  e+++L+++r  +++r+++ k++  lW +v+ +m+++gf+r+ +qCk+kw+nl +ryk +++++ k    +++ +p++d+l+
  XP_022978267.1  36 WSVPETKELLAIRAALDRRFSEMKQNRMLWISVAGNMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKA---RKQPFPFYDDLH 117
                     ********************************************************************96...34469****997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MENCDRRAFL HRRTNRIGVN AEAAAAAAAE DRFPAWSVPE TKELLAIRAA LDRRFSEMKQ  60
NRMLWISVAG NMKAKGFNRN DEQCKCKWKN LVTRYKGCET MDPKARKQPF PFYDDLHTIF  120
TARMQKNWWI EPKNRAKDSK RKATTERLSS EDMNEEEAKR GKRRREEDER SNLKEIMKGF  180
VEREKEMERQ WREAFRVREE ERRLKEKEWR MKMEGLEREK MMTWIMWREK EDERREREEA  240
RALNTHAFIS ALLRSFT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G01380.11e-39Trihelix family protein