PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022978335.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family HSF
Protein Properties Length: 297aa    MW: 33135 Da    PI: 5.7767
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022978335.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind114.28.6e-36101012102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+y++++d+++++++sw+++g +f+v+++ +fa+++Lp+yFkh+nf+SFvRQLn+YgF+k+  ++         weF++++F++g+k+ll+k
  XP_022978335.1  10 FLTKTYQLVDDPATDDVVSWNQSGATFIVWKTADFARDLLPTYFKHNNFSSFVRQLNTYGFRKIVPDK---------WEFANDNFRRGHKDLLSK 95 
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k+
  XP_022978335.1  96 IRRRKT 101
                     ***986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MAQRSLPAPF LTKTYQLVDD PATDDVVSWN QSGATFIVWK TADFARDLLP TYFKHNNFSS  60
FVRQLNTYGF RKIVPDKWEF ANDNFRRGHK DLLSKIRRRK TVVMSQPSQT AHPGKFGGGG  120
NSSPSNSGED IGSTSTSSPD SKNPGSVEMG TMAQFADLTE ENEKLRKDNE ILNSELAQTK  180
KQCDELVVFL TDYLKVAPDQ INNIMRNRGS GADLKGKGKI DDDDDDEEEE EEEEEGSVGN  240
GGETLKLFGV WLKGKEEKKK MKRVREEKIG CSNAPHAKAM KSVEMHAPLM TSSNLCN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.18e-85HSF family protein