PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022978700.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 448aa MW: 49915.6 Da PI: 6.8378

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022978700.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.5	6.1e-19	186	283	3	98
EE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 3 kvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 k l++sdv+++gr+vlpk+ aee+ +e+++++++ s+++W +k++y +++s++yvl+ ++ +Fv++ngLk gD ++++ +++++ XP_022978700.1 186 KDLKNSDVGSLGRIVLPKREAEENlpllT--DKEGIQIVMREvHSNKKWAMKYKYwaNNRSRMYVLE-NTGDFVRQNGLKMGDLMTLY--EDECK 275 7899********************653..447789999995666****9877888889999.******************..66999 PP ..EEEEE- CS B3 91 elvvkvfr 98 +++v v++ XP_022978700.1 276 NMYVAVVK 283 99998875 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
MDDDNHHHDL APLSSATLSA ATILLSPPPP PPQDSHLPPI LSQHCLGFSS PAPKSYFFTN 60 PPPPLHDQLP SHFPPSSAFL SHGFNDLTTS LLQKDEGRRV LDAWSTKVAR SKRRLARQRT 120 LTLSRISSSS SSSSASSSGF GYNNDEYSKG LMATHFLNTD THNNANPNNF TLCTPDNKIL 180 RMLLKKDLKN SDVGSLGRIV LPKREAEENL PLLTDKEGIQ IVMREVHSNK KWAMKYKYWA 240 NNRSRMYVLE NTGDFVRQNG LKMGDLMTLY EDECKNMYVA VVKGENDSRR EENEEMVRNN 300 DKNNKKNNQP CSFTNMCIKD EEEDASLAML IEELKHKPED EDRPLSCSTS TSSSNSSSNN 360 NNNAVMASDS YLSTTQQQPS SSNMMGAAAA KGIHNSNNNK KKKNGSKEGG EDLQAVNGLE 420 DCFRGLDTLP EVSGFKFPLF DYLSNDRT

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

MDDDNHHHDL APLSSATLSA ATILLSPPPP PPQDSHLPPI LSQHCLGFSS PAPKSYFFTN  60
PPPPLHDQLP SHFPPSSAFL SHGFNDLTTS LLQKDEGRRV LDAWSTKVAR SKRRLARQRT  120
LTLSRISSSS SSSSASSSGF GYNNDEYSKG LMATHFLNTD THNNANPNNF TLCTPDNKIL  180
RMLLKKDLKN SDVGSLGRIV LPKREAEENL PLLTDKEGIQ IVMREVHSNK KWAMKYKYWA  240
NNRSRMYVLE NTGDFVRQNG LKMGDLMTLY EDECKNMYVA VVKGENDSRR EENEEMVRNN  300
DKNNKKNNQP CSFTNMCIKD EEEDASLAML IEELKHKPED EDRPLSCSTS TSSSNSSSNN  360
NNNAVMASDS YLSTTQQQPS SSNMMGAAAA KGIHNSNNNK KKKNGSKEGG EDLQAVNGLE  420
DCFRGLDTLP EVSGFKFPLF DYLSNDRT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28300.1	2e-46	B3 family protein