PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022978800.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 206aa MW: 22048.6 Da PI: 7.5884

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022978800.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	112.9	4.5e-35	55	132	6	67
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt................ss 67 +++ ++hTkv+gR+RRvR++a+caar+F+L++eLG+ +d++tieWLl+qa+p+i+++tgt ss XP_022978800.1 55 SSSRDRHTKVNGRGRRVRMPALCAARIFQLTRELGHRSDGETIEWLLRQAEPSIIAATGTgtvpaapistitpamaSS 132 5789********************************************************544444444333332222 PP

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence
MGSEIALHKF PSSSDHHSQS TAASHSVVRN NSSPTNVTQQ SVVPRKSTAS LSSSSSSRDR 60 HTKVNGRGRR VRMPALCAAR IFQLTRELGH RSDGETIEWL LRQAEPSIIA ATGTGTVPAA 120 PISTITPAMA SSAPSVSCRV QSVGVAADEQ GMFAMPSCRL DLCQPVGLDY SAAGNDYRHM 180 PFTALLLQPS TADEAEERQE GEVFRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37000.1	1e-38	TCP family protein