PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022978807.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 230aa    MW: 26000.3 Da    PI: 10.962
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022978807.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.11.5e-0858107352
                     HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIk 52 
                     ++h  +E+ RR+ri   +++Lr +lP+   k++  K  Ka +L ++++ +k
  XP_022978807.1  58 QKHRLAEQSRRNRISGQYDTLRAILPSiY-KTDMSKIKKAFVLSETIRLVK 107
                     68*************************55.999999*******99999877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MESLHDRASS GQVMQSIKGY PTSGTMHQMY PQGQPLMIKH YSPISSFPRK ENTLHAAQKH  60
RLAEQSRRNR ISGQYDTLRA ILPSIYKTDM SKIKKAFVLS ETIRLVKEFK KLVSEKRAAN  120
REVRDCGIPS GADRLSLEHC DGGEGMVKAV MSCEDRPNIM AELAKALKTV KVKLVRAEIV  180
TMGGRNKFAL WMQGPKEGLG VLKRVLEAVM RRPSWTARKH RSSWHSRASK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38070.11e-22bHLH family protein