PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022978837.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family TCP
Protein Properties Length: 454aa    MW: 49472.6 Da    PI: 7.8761
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022978837.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP118.58.4e-37862352134
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.................ssssasec.eaess 78 
                      g+kdrhsk+ T++g+RdRRvRls+ +a++f+dLqd+LGfd++sk+ieWL+++a  ai el+++                        + +++s 
  XP_022978837.1  86 SGGKDRHSKVWTSKGLRDRRVRLSVATAIQFYDLQDRLGFDQPSKAIEWLIKAAADAIAELPSLnasfpetpkqlsgekisV------TdQPGSL 174
                     689*************************************************************776654444433332220......1222222 PP

             TCP  79 sssasnsssg.........kaaksaakskksqksaasalnlak....esrakarararertrekmrikn 134
                              +          + +++a+s++s++s+ s l+l++      r kar+ra+er ++++ +++
  XP_022978837.1 175 D--------PveqnqsqlhVSLSKSACSSNSETSKGSGLSLSRsevrVNRLKARERAKERAQKEKEKEQ 235
                     2........022222223344444446666666666666666642336669999999996655554443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 454 aa     Download sequence    
MEVVDNIQEQ PRKFPRLATS RSSDSNKIGL KGIENIQPED EEEKESKRVG GSTTLVGSGG  60
VGGDDDDGNR LRGWHHSRII RVSRASGGKD RHSKVWTSKG LRDRRVRLSV ATAIQFYDLQ  120
DRLGFDQPSK AIEWLIKAAA DAIAELPSLN ASFPETPKQL SGEKISVTDQ PGSLDPVEQN  180
QSQLHVSLSK SACSSNSETS KGSGLSLSRS EVRVNRLKAR ERAKERAQKE KEKEQDSSRI  240
ADHNLTSMAP NSSFTELLSG GSATVSAHRD AGMAVERQWQ SSTVAMDYFS SGILESSTSR  300
THHSSGFSEQ MNLGTPLPQT MSITPLFSSV SASDNNAEQL HHFSFVHDGN IIPVATTQPA  360
GGSDYNLNFT IASNLPGYYR GTLQSNSSLL PHIQRFSPVD GSNLPFLFGA ATSSAAPQME  420
NHHHYQFSPA FDGRLQLCYG GGSRQSEQKG KEKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18390.16e-72TCP family protein