PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022978926.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

GRF

Protein Properties

Length: 567aa MW: 61709.8 Da PI: 8.1251

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022978926.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.6	2.5e-24	219	263	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e+ XP_022978926.1 219 DPEPGRCRRTDGKKWRCSRDAVADQKYCERHINRGRHRSRKPVES 263 79****************************************986 PP
2	QLQ	54	5.2e-19	150	186	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT +Q+ +L++Q+l+yKyL++n+P+P++Ll +++k XP_022978926.1 150 GPFTQSQWVELEHQALIYKYLSSNVPLPSNLLIPLKK 186 59*******************************9975 PP

Sequence ? help Back to Top
Protein Sequence Length: 567 aa Download sequence
MDFGVVGLDG FVDSGDAPSP HSKLKSLGSC FSKQDRSGFV DDDWRNSKIP KTEPISGSKT 60 MPLHQGFPLL RSNTFISSSD GRQKEHMLSF SSLKSETSLL PKHSDLIARN PQNSIFPHNQ 120 QKSSVYSRNT GCVSGSYNGS MHGGIAGIRG PFTQSQWVEL EHQALIYKYL SSNVPLPSNL 180 LIPLKKSLYP YGFTCSSAGS MPPNSRWGSF HLGFSGNTDP EPGRCRRTDG KKWRCSRDAV 240 ADQKYCERHI NRGRHRSRKP VESQTGHSAP GTTNPTPMVT SMSTSLSSTV VPSGGASNNL 300 PVIPHQLKSL HPVAASDPGA DAPGNRLLNR ETVCSRIQET GGLSMMSSNV NLMASNEKSG 360 AKQEISEGDE FGLVSTDSLL NPSQQRGSYA NPKNYDSFLI FSDQETQDHD QHPLRQFFED 420 WPKDQSSRSV MTWPEEFKSD WTQLSMSIPM SDFSSSSSSP THEKLAQSPP LRLSRELEPI 480 QMNLVARKND DELVQKQSNQ IAAAMCWGSS MGGPLGEALT NGSNCVKGSK VPPSLNLLGE 540 GWDGSQLGSS PTGVLQKATF CSLSNSS

Sequence ? help Back to Top

Protein Sequence Length: 567 aa Download sequence

MDFGVVGLDG FVDSGDAPSP HSKLKSLGSC FSKQDRSGFV DDDWRNSKIP KTEPISGSKT  60
MPLHQGFPLL RSNTFISSSD GRQKEHMLSF SSLKSETSLL PKHSDLIARN PQNSIFPHNQ  120
QKSSVYSRNT GCVSGSYNGS MHGGIAGIRG PFTQSQWVEL EHQALIYKYL SSNVPLPSNL  180
LIPLKKSLYP YGFTCSSAGS MPPNSRWGSF HLGFSGNTDP EPGRCRRTDG KKWRCSRDAV  240
ADQKYCERHI NRGRHRSRKP VESQTGHSAP GTTNPTPMVT SMSTSLSSTV VPSGGASNNL  300
PVIPHQLKSL HPVAASDPGA DAPGNRLLNR ETVCSRIQET GGLSMMSSNV NLMASNEKSG  360
AKQEISEGDE FGLVSTDSLL NPSQQRGSYA NPKNYDSFLI FSDQETQDHD QHPLRQFFED  420
WPKDQSSRSV MTWPEEFKSD WTQLSMSIPM SDFSSSSSSP THEKLAQSPP LRLSRELEPI  480
QMNLVARKND DELVQKQSNQ IAAAMCWGSS MGGPLGEALT NGSNCVKGSK VPPSLNLLGE  540
GWDGSQLGSS PTGVLQKATF CSLSNSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	3e-92	GRF family protein