PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022979272.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 353aa MW: 39869.5 Da PI: 9.4869

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022979272.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.1	3.2e-13	122	173	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ +++l+P++ + ++ + a+i A+e++k+L+ XP_022979272.1 122 QRMTHIAVERNRRRQMNDHLHVIKSLIPTS---YIQRGDQASIIGGAIEFVKELE 173 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MERLQPPLKP CFYGECSDRV SSEQEFTNLG FEELEDKIPF LQKLQNVESQ SFKQPNFQNL 60 VKLQHFNKPG EEGVGKIQDL LQLYSSPINS ETKDQNEPPN SKETRKRKRW KATKNKEEVE 120 SQRMTHIAVE RNRRRQMNDH LHVIKSLIPT SYIQRGDQAS IIGGAIEFVK ELEQLLEVLE 180 AQRKGRKGVD GGCKGAQSEV GMGSNGRIGE GVCAEMKSEV GEIEVTMIQT HVSLKIRCPK 240 RQGQLLKAIV GLEDLRLSVL HLNITTSQAT ATMLYSFNLK IEDECKLGSA EQIAGAVHQI 300 FSFINDGSQV KSMRRRQISG RTVAVADYGR KGGPPFLPPY FPSKKKERKE ESK

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MERLQPPLKP CFYGECSDRV SSEQEFTNLG FEELEDKIPF LQKLQNVESQ SFKQPNFQNL  60
VKLQHFNKPG EEGVGKIQDL LQLYSSPINS ETKDQNEPPN SKETRKRKRW KATKNKEEVE  120
SQRMTHIAVE RNRRRQMNDH LHVIKSLIPT SYIQRGDQAS IIGGAIEFVK ELEQLLEVLE  180
AQRKGRKGVD GGCKGAQSEV GMGSNGRIGE GVCAEMKSEV GEIEVTMIQT HVSLKIRCPK  240
RQGQLLKAIV GLEDLRLSVL HLNITTSQAT ATMLYSFNLK IEDECKLGSA EQIAGAVHQI  300
FSFINDGSQV KSMRRRQISG RTVAVADYGR KGGPPFLPPY FPSKKKERKE ESK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	123	134	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61950.1	9e-67	bHLH family protein