PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022979535.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 231aa    MW: 25739.4 Da    PI: 6.2505
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022979535.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.9e-1857106356
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     ++GVr +  +g+Wv+eIr+p++   ++r++lg++ t+e+Aa+a++ a+++++g+
  XP_022979535.1  57 FRGVRKRN-WGKWVSEIREPRK---KTRIWLGTYPTPEMAARAHDSAALAIKGH 106
                     8****887.**********843...6***********************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    
MEPSFNLTED SDAKATTFCP SSSSSSSITT PCSQERQPVS QKRNRRRTQE QSNHPMFRGV  60
RKRNWGKWVS EIREPRKKTR IWLGTYPTPE MAARAHDSAA LAIKGHSAFL NFPELAQFLP  120
RPLSMSHKDI QAAAAQAAAA TFSAGSNHEG GGGEAAEESR ETLFPRSDGG DRTEDSTNST  180
GDETLFDLPD LFVGSCDLKE RFLYHSWSWQ FCAAADNSGF RLEEPSFWEL I
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13646RQPVSQKRNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.14e-49ERF family protein