PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022979622.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GATA
Protein Properties Length: 345aa    MW: 37607.9 Da    PI: 5.8753
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022979622.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA565.3e-18252286135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++C + kTp+WR gp g+ktLCnaCG++y++ +l
  XP_022979622.1 252 CQHCAAEKTPQWRTGPMGPKTLCNACGVRYKSGRL 286
                     *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MPKTFHICAY TPPLPSQKPP FPLFSGNSNY SPVTCSAFME VPEYLVGGYY DTDGAQFSPD  60
KQNSAAENFA VDEYLLNFSN EDMAMHSGCF DNVAGNCCDS STVTAIESCN SSASSGDNLV  120
LGNFGSGGFC EAQFSNELCI PCDDLAELEW LSNFVEGSFS TEEIEKDFQA IPFLSGGIST  180
AVTLEAQSSS GATALGYRSE KTTSFFHGEA LTLPGKARSK RSRGSPCDWS TRVLRATAPE  240
AGKSEMTSGR KCQHCAAEKT PQWRTGPMGP KTLCNACGVR YKSGRLVPEY RPAASPTFMS  300
TKHSNSHRKV MELRRQNEVE QLGRWKGGEE YLIHRHNGGD LSRMM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.13e-62GATA family protein