PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022979731.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ARR-B

Protein Properties

Length: 638aa MW: 70696.5 Da PI: 6.564

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022979731.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89	4.4e-28	205	258	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++F+ av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl XP_022979731.1 205 KPRVVWSVELHQQFMAAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 258 79*****************.******************************8 PP
2	Myb_DNA-binding	40.3	7.2e-13	207	257	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++ av+qlG + +k+I + m+ g+t++++ s++qky+ XP_022979731.1 207 RVVWSVELHQQFMAAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 257 678***********************************************7 PP
3	Response_reg	74.4	4.2e-25	26	134	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ +++l+++l+ +y +v+ ++ +e+al ll++ + +D++l D+ mp+mdG++ll+ i e +lp+i+++ + ++ + + + G XP_022979731.1 26 VLVVDDDPTCLMILEKMLRICRY-DVTNCSRAEDALSLLRRYKngFDIVLSDVHMPDMDGFKLLEYIGLEM-DLPVIMMSVDDGKNVVMKGVTHG 118 89*******************.***********999999******************6654.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +e++ + XP_022979731.1 119 ACDYLIKPVRIEAIKN 134 *********99976 PP

Sequence ? help Back to Top
Protein Sequence Length: 638 aa Download sequence
MSTASSSSVR KAGEAVPDQF PVGLRVLVVD DDPTCLMILE KMLRICRYDV TNCSRAEDAL 60 SLLRRYKNGF DIVLSDVHMP DMDGFKLLEY IGLEMDLPVI MMSVDDGKNV VMKGVTHGAC 120 DYLIKPVRIE AIKNIWQHVV RKRKNEWKDL EQSGCVDDVV DRQQKTNEDA DYSSSANEGS 180 WKNSKRRKED VEDVEERDDS STLKKPRVVW SVELHQQFMA AVNQLGIDKA VPKKILELMN 240 VPGLTRENVA SHLQKYRLYL RRVSGITQHQ SNLNNTFMSA QDVFGSSLNG LDLRTLAAAG 300 QLQPQSLATL QAAGFGRSTV KSSMPMPLVD QRNHIFSFEN PKLRFGDEQQ QHLNGSKSMN 360 LLHGIPTTME PKQLANLQQS AQSHGNMTMQ VSAQGSQSSS QPQARAQILK ESTSTSVTRL 420 PPTSQQPILP NGTASGGYSV VSPASTMLNF PEFPGNSFPL QSTPGMSSVV PKGRFPDDVN 480 SNINRSEGFV PNYDMFRDLH PQKPHDWDLQ HVGVTFDMSQ GSLNVPSSAF AHQGYAASSQ 540 QNGQNRNAST AGKAMFLLDK RSDNGNEQSI SQQLDPRFVD GSVRVKAERA PDTSSQTDLF 600 SEHFGPEDLM SAVLKQQQGS IAAAESELEW MFHHNTPV

Sequence ? help Back to Top

Protein Sequence Length: 638 aa Download sequence

MSTASSSSVR KAGEAVPDQF PVGLRVLVVD DDPTCLMILE KMLRICRYDV TNCSRAEDAL  60
SLLRRYKNGF DIVLSDVHMP DMDGFKLLEY IGLEMDLPVI MMSVDDGKNV VMKGVTHGAC  120
DYLIKPVRIE AIKNIWQHVV RKRKNEWKDL EQSGCVDDVV DRQQKTNEDA DYSSSANEGS  180
WKNSKRRKED VEDVEERDDS STLKKPRVVW SVELHQQFMA AVNQLGIDKA VPKKILELMN  240
VPGLTRENVA SHLQKYRLYL RRVSGITQHQ SNLNNTFMSA QDVFGSSLNG LDLRTLAAAG  300
QLQPQSLATL QAAGFGRSTV KSSMPMPLVD QRNHIFSFEN PKLRFGDEQQ QHLNGSKSMN  360
LLHGIPTTME PKQLANLQQS AQSHGNMTMQ VSAQGSQSSS QPQARAQILK ESTSTSVTRL  420
PPTSQQPILP NGTASGGYSV VSPASTMLNF PEFPGNSFPL QSTPGMSSVV PKGRFPDDVN  480
SNINRSEGFV PNYDMFRDLH PQKPHDWDLQ HVGVTFDMSQ GSLNVPSSAF AHQGYAASSQ  540
QNGQNRNAST AGKAMFLLDK RSDNGNEQSI SQQLDPRFVD GSVRVKAERA PDTSSQTDLF  600
SEHFGPEDLM SAVLKQQQGS IAAAESELEW MFHHNTPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	0.0	ARR-B family protein