PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022979875.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 323aa    MW: 35396.6 Da    PI: 7.0303
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022979875.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.84e-32163221159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK vk+s++prsYYrCt+ gC vkk+ver ++d+++v++tYeg+H+h+
  XP_022979875.1 163 LDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCGVKKRVERLSNDQSTVVTTYEGQHTHQ 221
                     59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MDKKLEDTMM GSENSAGKYS PVVFSDEFPA TSFGSYPGVF DMPCDDHKAA ASCSSNSFDL  60
LGSGIDFYNP LSSLFDLVST TAPLLSSPAS TVPESSEVVN APPTPNSSSV SSYSNDAAAI  120
EEVDKSNTEK PSSSNVLKPK KKNQKKQREP RFAFMTKSDI DHLDDGYRWR KYGQKAVKNS  180
PYPRSYYRCT TVGCGVKKRV ERLSNDQSTV VTTYEGQHTH QSPIIPRGSI RVLPESNLDV  240
TSTTGLLFQP NTPQSFMYSP PPPFLTINSL STNPRPPSSF PPPPPPPPPP PPSSQAFMLR  300
DHGLLQDLVP LQMRKEPKDE QNG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49520.12e-50WRKY family protein