PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022979876.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family WRKY
Protein Properties Length: 304aa    MW: 33400.4 Da    PI: 8.1781
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022979876.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.93.6e-32144202159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK vk+s++prsYYrCt+ gC vkk+ver ++d+++v++tYeg+H+h+
  XP_022979876.1 144 LDDGYRWRKYGQKAVKNSPYPRSYYRCTTVGCGVKKRVERLSNDQSTVVTTYEGQHTHQ 202
                     59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MDKKLEDTMM GSENSAGKYS PVVFSDEFPA TSFGSSNSFD LLGSGIDFYN PLSSLFDLVS  60
TTAPLLSSPA STVPESSEVV NAPPTPNSSS VSSYSNDAAA IEEVDKSNTE KPSSSNVLKP  120
KKKNQKKQRE PRFAFMTKSD IDHLDDGYRW RKYGQKAVKN SPYPRSYYRC TTVGCGVKKR  180
VERLSNDQST VVTTYEGQHT HQSPIIPRGS IRVLPESNLD VTSTTGLLFQ PNTPQSFMYS  240
PPPPFLTINS LSTNPRPPSS FPPPPPPPPP PPPSSQAFML RDHGLLQDLV PLQMRKEPKD  300
EQNG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49520.17e-51WRKY family protein