PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022980321.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 383aa MW: 42811.7 Da PI: 5.3121

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022980321.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.2	2.6e-12	184	235	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+l+P + + ++ + a+i A+e++++L+ XP_022980321.1 184 QRMTHIAVERNRRKQMNEHLRVLRSLMPGS---YVQRGDQASIIGGAIEFVRELE 235 79**************************...9***************9995 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MEKDDNYSNE APMPPSFSSH HHHHHDLYNN QDQFMRSRPF ETSADNATGI LTYFPANPLP 60 PPPLQSVTSP DKLSFAEVMQ FADFGPKLSL NRFDEDDEPA GIDPVYFLKF PVLNNERAEE 120 AAAGEEEAAE MGGRIVGELE EEENFRNNKN GNNNNNNNNN NGNGNSNKRK RGRTVKTSEE 180 VESQRMTHIA VERNRRKQMN EHLRVLRSLM PGSYVQRGDQ ASIIGGAIEF VRELEQLLQC 240 LESQKRRRLL GEPPLQAGDT PPPQQPPFLP PGAGNFGGHQ NEGQILETTA ESKSCLADVE 300 VKVLGFDAMI KILSRRRPGQ LIKAIAALED LHLNILHTNI TTIEQTVLYS FNVKIASESR 360 FTAEDIASSV QQIFGFIHAN TGM

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MEKDDNYSNE APMPPSFSSH HHHHHDLYNN QDQFMRSRPF ETSADNATGI LTYFPANPLP  60
PPPLQSVTSP DKLSFAEVMQ FADFGPKLSL NRFDEDDEPA GIDPVYFLKF PVLNNERAEE  120
AAAGEEEAAE MGGRIVGELE EEENFRNNKN GNNNNNNNNN NGNGNSNKRK RGRTVKTSEE  180
VESQRMTHIA VERNRRKQMN EHLRVLRSLM PGSYVQRGDQ ASIIGGAIEF VRELEQLLQC  240
LESQKRRRLL GEPPLQAGDT PPPQQPPFLP PGAGNFGGHQ NEGQILETTA ESKSCLADVE  300
VKVLGFDAMI KILSRRRPGQ LIKAIAALED LHLNILHTNI TTIEQTVLYS FNVKIASESR  360
FTAEDIASSV QQIFGFIHAN TGM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	185	196	RMTHIAVERNRR
2	245	249	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24140.1	1e-113	bHLH family protein