PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022980407.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MIKC_MADS
Protein Properties Length: 213aa    MW: 24342.8 Da    PI: 9.0794
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022980407.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF90.11.1e-281059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    rien + rqvtfskRrng+lKKA+ELSvLCdae a+ii sstgklye++s
  XP_022980407.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCDAELALIICSSTGKLYEFAS 59
                    8***********************************************86 PP
2K-box782.4e-26841711097
           K-box  10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                     + ++    q+e++ L +eie+L+ ++R+llGe+L+s s++eLqq+e+qLe+sl +++++K+e+++eqie+l++kek l  en +L kk
  XP_022980407.1  84 HRHELHLVQNEATSLLDEIESLEVSKRKLLGEGLGSSSYEELQQIEKQLERSLAHVKARKYEVYKEQIEQLKEKEKYLTAENAKLAKK 171
                     45566778*****************************************************************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MVRGKTEMRR IENATSRQVT FSKRRNGLLK KAFELSVLCD AELALIICSS TGKLYEFASS  60
SLQATVGRYL RHTKATHHLQ PPSHRHELHL VQNEATSLLD EIESLEVSKR KLLGEGLGSS  120
SYEELQQIEK QLERSLAHVK ARKYEVYKEQ IEQLKEKEKY LTAENAKLAK KCFVQHELRQ  180
SSAQVGEVST HLEHNSIFDI ETELFIGPPK SIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.19e-67MIKC_MADS family protein