PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022980662.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

GRF

Protein Properties

Length: 345aa MW: 38750.9 Da PI: 7.5191

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022980662.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	79.5	3.2e-25	107	150	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++ +++k+CE+H+hrgr+rsrk++e XP_022980662.1 107 DPEPGRCRRTDGKKWRCSKEAFPDSKYCEKHMHRGRNRSRKPVE 150 79***************************************997 PP
2	QLQ	61.7	1.9e-21	41	76	1	36
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 s+FTa+Q+q+L++Q+l++Ky+++++P+Pp+L++ ++ XP_022980662.1 41 SPFTATQWQELEHQALIFKYMVSGVPIPPDLIFSVK 76 89******************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MNFAEIPIKK LAPPKNNVPS PSLSFKLSRT MNSSPKTCTT SPFTATQWQE LEHQALIFKY 60 MVSGVPIPPD LIFSVKRSLD SSISARLFPH QPIGWGCFEM GFGRKTDPEP GRCRRTDGKK 120 WRCSKEAFPD SKYCEKHMHR GRNRSRKPVE ISSSSSSSSS SSSMTCETQS YHHAPPPAAA 180 YHESSIHPFM YTQSSSSRPP CSDFSSNNTN PQLFLYSGTH SQADKDYRDI NGSREGVGVQ 240 AFFPSVAEVY NNQQPIAMDS YKGCSQFVTQ SHQIYNSKQA RQEQEQHCFV LGTDFNKSSR 300 SAIAEEEEQE QEQDGETQKP LLHFFEDCPP KNSDSWLDLA SNSNG

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MNFAEIPIKK LAPPKNNVPS PSLSFKLSRT MNSSPKTCTT SPFTATQWQE LEHQALIFKY  60
MVSGVPIPPD LIFSVKRSLD SSISARLFPH QPIGWGCFEM GFGRKTDPEP GRCRRTDGKK  120
WRCSKEAFPD SKYCEKHMHR GRNRSRKPVE ISSSSSSSSS SSSMTCETQS YHHAPPPAAA  180
YHESSIHPFM YTQSSSSRPP CSDFSSNNTN PQLFLYSGTH SQADKDYRDI NGSREGVGVQ  240
AFFPSVAEVY NNQQPIAMDS YKGCSQFVTQ SHQIYNSKQA RQEQEQHCFV LGTDFNKSSR  300
SAIAEEEEQE QEQDGETQKP LLHFFEDCPP KNSDSWLDLA SNSNG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	6e-67	GRF family protein