PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022980666.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 344aa MW: 37931.2 Da PI: 6.24

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022980666.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	15.3	3.6e-05	36	54	2	20
HHHHHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsaf 20 r +h+e E+rRR++iN+++ XP_022980666.1 36 RSKHSETEQRRRSKINERI 54 899**************98 PP
2	HLH	26.2	1.5e-08	71	103	19	55
HHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 19 afeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +f+ Lr+l+P++ ++K +Ka+ L +++eYI+ Lq XP_022980666.1 71 RFQILRDLIPQN----DQKRDKASFLLEVIEYIQFLQ 103 79*******9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MVKSSKSVHE RFQDDGNELG VKIEGKSGES KASGHRSKHS ETEQRRRSKI NERIFVTISR 60 FCEILCSDGG RFQILRDLIP QNDQKRDKAS FLLEVIEYIQ FLQEKLNMYE GSCQGWNSEP 120 SKLVPWKNYR AAESYVDHSQ VVKRGSNHES AVVFSQAMLT NAPNVMDADM GPAAVLNAVD 180 HTFVSATQGL PMGMHAQPIV FEPVGRGSLS TESLDEPASG SENISSKTQT ELLQGRTHTT 240 TGFLNHAVSD QEDLSVESEM EGISGVYSHG LLSTLTQALQ ASGVDLSQTN ISVKVDVGRR 300 ANRSLSLSED DKKQSLNNQV TAQSLHGYFS EDSEQAHKKL RTGV

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MVKSSKSVHE RFQDDGNELG VKIEGKSGES KASGHRSKHS ETEQRRRSKI NERIFVTISR  60
FCEILCSDGG RFQILRDLIP QNDQKRDKAS FLLEVIEYIQ FLQEKLNMYE GSCQGWNSEP  120
SKLVPWKNYR AAESYVDHSQ VVKRGSNHES AVVFSQAMLT NAPNVMDADM GPAAVLNAVD  180
HTFVSATQGL PMGMHAQPIV FEPVGRGSLS TESLDEPASG SENISSKTQT ELLQGRTHTT  240
TGFLNHAVSD QEDLSVESEM EGISGVYSHG LLSTLTQALQ ASGVDLSQTN ISVKVDVGRR  300
ANRSLSLSED DKKQSLNNQV TAQSLHGYFS EDSEQAHKKL RTGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	6e-51	bHLH family protein