PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022980679.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 293aa MW: 32556.2 Da PI: 6.9739

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022980679.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	101.6	1.3e-31	56	179	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............................sss 68 g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl+ ak +i+el+ + s XP_022980679.1 56 FGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLpipsaslglhyqsmlpphtahrpefkinSG- 149 689*************************************************************555555555554444444333333222211. PP TCP 69 sasec.....eaesssssasnsssg..........k 89 ++++++++++++ + + XP_022980679.1 150 ----IdkveiDDDDEQKQHKSN--SnpssfsallnN 179 ....011121111111111111..112333344440 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MPAGKHDERH TMITNSKEEN SPPKLAASSS SSAAAAVATP WLRLKDPRIV RVSRAFGGKD 60 RHSKVCTIRG LRDRRVRLSV STAIQLYDLQ DRLGLNQPSK VVDWLLNVAK DEIDELPPLP 120 IPSASLGLHY QSMLPPHTAH RPEFKINSGI DKVEIDDDDE QKQHKSNSNP SSFSALLNNV 180 SAPPFGFHWD PSSSSSSSTT NLPFFTSQAE DLHNFNHVTP LSLSTGSQFL EFNNHLHQNF 240 FINNSLNTPP PMHSITHPAV RPFHFSMATK FVSQDKNNNG DPAHKEDDFG SDE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02150.1	9e-49	TCP family protein