PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022980680.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 291aa MW: 32487.1 Da PI: 7.1271

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022980680.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	101.6	1.3e-31	54	177	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............................sss 68 g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk ++WLl+ ak +i+el+ + s XP_022980680.1 54 FGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDEIDELPPLpipsaslglhyqsmlpphtahrpefkinSG- 147 689*************************************************************555555555554444444333333222211. PP TCP 69 sasec.....eaesssssasnsssg..........k 89 ++++++++++++ + + XP_022980680.1 148 ----IdkveiDDDDEQKQHKSN--SnpssfsallnN 177 ....011121111111111111..112333344440 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MRKHDERHTM ITNSKEENSP PKLAASSSSS AAAAVATPWL RLKDPRIVRV SRAFGGKDRH 60 SKVCTIRGLR DRRVRLSVST AIQLYDLQDR LGLNQPSKVV DWLLNVAKDE IDELPPLPIP 120 SASLGLHYQS MLPPHTAHRP EFKINSGIDK VEIDDDDEQK QHKSNSNPSS FSALLNNVSA 180 PPFGFHWDPS SSSSSSTTNL PFFTSQAEDL HNFNHVTPLS LSTGSQFLEF NNHLHQNFFI 240 NNSLNTPPPM HSITHPAVRP FHFSMATKFV SQDKNNNGDP AHKEDDFGSD E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02150.1	7e-49	TCP family protein