PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022980720.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 233aa MW: 26164.4 Da PI: 8.0371

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022980720.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.1	1.6e-08	153	194	8	54
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + r+RR++i +++ L++l+P K++ a++L +A Y+k L XP_022980720.1 153 AARKRREKISEKIRALQRLVPGG-----SKMDTASMLDEAASYLKFL 194 669****************95.....5**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MDDLLWNGSW SNEEHNGCNE SLFVSDDSSR CSSLPLQELQ MVARMSKFPE MAKDSESWSE 60 GDLLEELEND KGIAPKGGVL DIFENHKSKQ QNSTTSSSNN DEVKPFNRDR AMSQMKELVY 120 YAAVFRPVSS GSETVKKKRR RNVNTSKEPQ TVAARKRREK ISEKIRALQR LVPGGSKMDT 180 ASMLDEAASY LKFLRAQIKA LEGLSYKLGS IDCLSTSTSF NPPFSTINAY FPL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	136	141	KKKRRR
2	136	158	KKKRRRNVNTSKEPQTVAARKRR
3	136	160	KKKRRRNVNTSKEPQTVAARKRREK
4	137	159	KKKRRRNVNTSKEPQTVAARKRR
5	137	161	KKKRRRNVNTSKEPQTVAARKRREK
6	138	160	KKKRRRNVNTSKEPQTVAARKRR
7	138	162	KKKRRRNVNTSKEPQTVAARKRREK
8	139	161	KKKRRRNVNTSKEPQTVAARKRR
9	155	160	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21330.1	7e-32	bHLH family protein