PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022981045.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MIKC_MADS

Protein Properties

Length: 239aa MW: 27320.2 Da PI: 9.745

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022981045.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	84.5	6.3e-27	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRr g+lKKA+EL +LCda+v viifsst klyeyss XP_022981045.1 10 RIDNSTSRQVTFSKRRSGLLKKAKELAILCDADVGVIIFSSTSKLYEYSS 59 8***********************************************96 PP
2	K-box	87.1	3.4e-29	81	170	9	98
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++++ +++q+e+a L++++++Lq+++R+++Ge+L+ Ls+k+Lq+Le+qLe sl+ +R kK+++l+++i+el +k + +++ n++L kk+ XP_022981045.1 81 FSTSEVKYWQKEAAMLRQQLQSLQENHRQMMGEELTGLSIKDLQNLENQLEISLRGVRMKKDQILMDEIQELNRKGNLIHQGNMELYKKV 170 678999*********************************************************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MGRGKIVIRR IDNSTSRQVT FSKRRSGLLK KAKELAILCD ADVGVIIFSS TSKLYEYSST 60 SMKTLIERYN KTKEEHHQLG FSTSEVKYWQ KEAAMLRQQL QSLQENHRQM MGEELTGLSI 120 KDLQNLENQL EISLRGVRMK KDQILMDEIQ ELNRKGNLIH QGNMELYKKV NLIRQENLEL 180 YQKVYGTKDA NGASSLTNGL GVGEDAGIPI SLQLSQPQQQ NREAPERATK LGYSCEKMH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57230.1	1e-100	MIKC_MADS family protein