PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022981143.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

ARR-B

Protein Properties

Length: 379aa MW: 42506.6 Da PI: 8.1457

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022981143.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	83.8	1.9e-26	197	250	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++ + eLH++Fv+av+qL G++kA+Pk+il+lm+v+ Lt+e+v+SHLQkYRl XP_022981143.1 197 KPRVVRSVELHRKFVNAVNQL-GIDKAVPKKILDLMNVEKLTRENVASHLQKYRL 250 79999**************.******************************8 PP
2	Myb_DNA-binding	33.2	1.2e-10	204	249	6	48
HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 e++ ++v+av+qlG + +k+I m+ +++t++++ s++qky+ XP_022981143.1 204 VELHRKFVNAVNQLGIDkaVPKKILDLMNvEKLTRENVASHLQKYR 249 69**************************99***********7 PP
3	Response_reg	75.1	2.6e-25	20	128	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vdD+p+ + +l+++l++ +y +v+++ ++ al+ll+e++ +D++ D+ mp+mdG++ll+ e++lp+i+++a+g+++++ + + G XP_022981143.1 20 VLAVDDDPTCLLILETLLRRCHY-HVTTTNQAIMALKLLRENKnkFDVVTSDVHMPDMDGFKLLELVGL-EMDLPVIMLSANGDPKLVMKGITHG 112 799******************.***********888888***************87754.558****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +eel + XP_022981143.1 113 ACDYLLKPVRIEELKN 128 ***********987 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MTVEPRVDDP NDQFPVGMRV LAVDDDPTCL LILETLLRRC HYHVTTTNQA IMALKLLREN 60 KNKFDVVTSD VHMPDMDGFK LLELVGLEMD LPVIMLSANG DPKLVMKGIT HGACDYLLKP 120 VRIEELKNIW QHVIRRKKFD PKDQMNSINQ AKLDSENGEV ADPSGKFKKK RKDQNYDEDD 180 DQDCNGQEDD DSSTQKKPRV VRSVELHRKF VNAVNQLGID KAVPKKILDL MNVEKLTREN 240 VASHLQKYRL YLRRISCVAN QQANMVAALS SADPSYTRIG SLNGIGNFRS FTGPPPFPNT 300 AHRSIPTTGM LGRLNTPACM GMNGLSSPGT VPLESTFQPR PRSANMFQGM PESSGLDQVQ 360 HVKHGTVDNL SRAFDQRTV

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MTVEPRVDDP NDQFPVGMRV LAVDDDPTCL LILETLLRRC HYHVTTTNQA IMALKLLREN  60
KNKFDVVTSD VHMPDMDGFK LLELVGLEMD LPVIMLSANG DPKLVMKGIT HGACDYLLKP  120
VRIEELKNIW QHVIRRKKFD PKDQMNSINQ AKLDSENGEV ADPSGKFKKK RKDQNYDEDD  180
DQDCNGQEDD DSSTQKKPRV VRSVELHRKF VNAVNQLGID KAVPKKILDL MNVEKLTREN  240
VASHLQKYRL YLRRISCVAN QQANMVAALS SADPSYTRIG SLNGIGNFRS FTGPPPFPNT  300
AHRSIPTTGM LGRLNTPACM GMNGLSSPGT VPLESTFQPR PRSANMFQGM PESSGLDQVQ  360
HVKHGTVDNL SRAFDQRTV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	135	172	RRKKFDPKDQMNSINQAKLDSENGEVADPSGKFKKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	1e-125	ARR-B family protein