PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022981825.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 409aa    MW: 44527.1 Da    PI: 6.9256
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022981825.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.75.6e-052973351255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  XP_022981825.1 297 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 335
                     7788899*********998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 409 aa     Download sequence    
MESTADLHQL QDQLLVPPPP PSSPLSSPSS PIVPSCFSLP STHGWTPHIS LNNNNSCNYN  60
SRIFNGLSCS VPVRSDCGVK NTNSSMLLQD LGFEWNGVSS SGSFFSQFLH AGGKIKEEML  120
NTPSTNQDFH PFPSTNHVKN NDSDLNDPSH KLFIKTLISS GSQINGGDHI QPGQFFNMIY  180
PSINVSDWNL SSPPPLPFSN SLDLNLQTPP DLFHSQDSFA MFKQTLSDFH DQIHPPAAAA  240
AILPCSSSKM TTPFSAELTE PERPCTCIQP TLNQPSPPPL KKSRLDSRAS CPPFKVRKEK  300
LGDRIAALQQ LVAPFGKTDT ASVLMEAIGY IKFLQNQVET LSVPYMKPSC NRTTRPTYRS  360
SVEGGHEGQL DRDLRSRGLC LVPLGCLSYV TGDGGGIWTP PGFNGGTSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.13e-49bHLH family protein