PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022981826.1
Organism
Cucurbita maxima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 347aa    MW: 37857.8 Da    PI: 7.2221
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022981826.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH154.5e-052352731255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ ++++ L++l+ +      +K + a++L +A+ YIk Lq
  XP_022981826.1 235 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 273
                     7788899*********998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MAGLPISLFP VRSDCGVKNT NSSMLLQDLG FEWNGVSSSG SFFSQFLHAG GKIKEEMLNT  60
PSTNQDFHPF PSTNHVKNND SDLNDPSHKL FIKTLISSGS QINGGDHIQP GQFFNMIYPS  120
INVSDWNLSS PPPLPFSNSL DLNLQTPPDL FHSQDSFAMF KQTLSDFHDQ IHPPAAAAAI  180
LPCSSSKMTT PFSAELTEPE RPCTCIQPTL NQPSPPPLKK SRLDSRASCP PFKVRKEKLG  240
DRIAALQQLV APFGKTDTAS VLMEAIGYIK FLQNQVETLS VPYMKPSCNR TTRPTYRSSV  300
EGGHEGQLDR DLRSRGLCLV PLGCLSYVTG DGGGIWTPPG FNGGTSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.15e-50bHLH family protein