PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022981860.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

DBB

Protein Properties

Length: 283aa MW: 30826.2 Da PI: 4.3631

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022981860.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.8	1.9e-07	4	34	5	35
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHk 35 C+ +++ e+ lfC+ ++ lC +C H+ XP_022981860.1 4 QCDVCSKDEALLFCTADDAALCSTCDHRVHH 34 7****99****************9974 PP
2	zf-B_box	26.7	1.2e-08	56	87	4	35
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHk 35 + C+ ++e ++ lfC++++ lC+dC l +H+ XP_022981860.1 56 PLCDICQERRAFLFCQQDRAILCKDCDLPIHS 87 78***************************994 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MKIQCDVCSK DEALLFCTAD DAALCSTCDH RVHHANVLAS KHLRFPLLHP NNNNFPLCDI 60 CQERRAFLFC QQDRAILCKD CDLPIHSVNE LTQKHDRFLL TGVKLSCESS GNVPSSSSMS 120 EKMANASSAP VSNSPSIAES STSNAQTVGA STDGCEAMNG VEYFIDAISG WHFDEFLDSS 180 STDAPPFGFC KSDEVDGDWV FLFVDDLVEL ETSADSFSSE DWGIWSPEEE AAVPLFCSEI 240 EMEEGKKGRT LKEKTRGGGG GGGGDGGISV PEVDLRPRRF RFS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	5e-49	DBB family protein