PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022981872.1

Organism

Cucurbita maxima

Taxonomic ID

3661

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Protein Properties

Length: 481aa MW: 54057.4 Da PI: 8.217

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022981872.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	52.7	7.6e-17	79	169	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+kv++ps+ + +l lp+ f+++h +++++ ++l+desg ++ k+ +k++ l++GW++F a++L++gD++vF+l+ ++f +v XP_022981872.1 79 FIKVMLPSHITGGFWLGLPRGFCDSHL--PRQDTAMILQDESGMGFQTKYLSEKTG----LSAGWRGFSLAHNLQQGDVLVFHLVMPNKF--MVY 165 89**********************5..457889***********444444....*********************9865666..999 PP EE-S CS B3 96 vfrk 99 ++r+ XP_022981872.1 166 IVRS 169 9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
MNRGRPRKEK LFRRKSWASI TPPGTSYDQE TAQSFSHPRS VKFKRTTIDS IYNDRQSRSI 60 VMAQAKEVQA KLPPGYPSFI KVMLPSHITG GFWLGLPRGF CDSHLPRQDT AMILQDESGM 120 GFQTKYLSEK TGLSAGWRGF SLAHNLQQGD VLVFHLVMPN KFMVYIVRSN AVAEDGGAPG 180 FEPVYIVRSN AVAEDGGAPG FERRAYNKQT PLYSKENVPY MKEKQMALDN VNSKEADIHP 240 VKNEECDNPV SLAIDIHKDH GQTSDRVHKD TEMMPVLEES ENNRNSFGSN SMNGIRLSNS 300 TPDFEKVKSL NDFIISVNGL IIDSEFSSHV RAKYFELCSS QKAFLHEHIL EGLNYKLVSG 360 IISETINIAD AIRACKVGST SQEHFTTWDK SLTAFEGLGM NVAFLRSRIY RLLTLSIKIE 420 MKRKAELKRD STQEEIRTLV AKIMEARSAV KQLEAEIQCL ENTDGGGNME TLFKEVASAP 480 W

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

MNRGRPRKEK LFRRKSWASI TPPGTSYDQE TAQSFSHPRS VKFKRTTIDS IYNDRQSRSI  60
VMAQAKEVQA KLPPGYPSFI KVMLPSHITG GFWLGLPRGF CDSHLPRQDT AMILQDESGM  120
GFQTKYLSEK TGLSAGWRGF SLAHNLQQGD VLVFHLVMPN KFMVYIVRSN AVAEDGGAPG  180
FEPVYIVRSN AVAEDGGAPG FERRAYNKQT PLYSKENVPY MKEKQMALDN VNSKEADIHP  240
VKNEECDNPV SLAIDIHKDH GQTSDRVHKD TEMMPVLEES ENNRNSFGSN SMNGIRLSNS  300
TPDFEKVKSL NDFIISVNGL IIDSEFSSHV RAKYFELCSS QKAFLHEHIL EGLNYKLVSG  360
IISETINIAD AIRACKVGST SQEHFTTWDK SLTAFEGLGM NVAFLRSRIY RLLTLSIKIE  420
MKRKAELKRD STQEEIRTLV AKIMEARSAV KQLEAEIQCL ENTDGGGNME TLFKEVASAP  480
W

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42700.1	2e-39	B3 family protein